STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_2591TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3268 nitrate transport permease. (328 aa)    
Predicted Functional Partners:
Veis_2590
KEGG: pol:Bpro_3267 twin-arginine translocation pathway signal.
 
 
 0.996
Veis_2592
KEGG: rfr:Rfer_2556 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.996
Veis_3974
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_2170 nitrate transport ATP-binding subunits C and D.
 
 0.984
Veis_3972
KEGG: pol:Bpro_0292 ABC transporter nitrate-binding protein.
 
 
 0.983
Veis_2595
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pol:Bpro_3279 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.973
Veis_3973
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0291 nitrate transport permease.
  
  
 
0.908
Veis_3789
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B4886 ABC transporter related.
  
 0.786
Veis_0384
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_3541 ABC transporter related.
 
  
 0.785
Veis_0767
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO7545 putative ABC-transport protein, ATP-binding component.
  
 0.781
Veis_0618
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr2838 ABC transporter ATP-binding protein.
 
  
 0.779
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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