STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_3509PFAM: aldehyde dehydrogenase; KEGG: ccr:CC0419 aldehyde dehydrogenase. (477 aa)    
Predicted Functional Partners:
Veis_3218
Acetyl-coenzyme A synthetase; TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_2581 acetate--CoA ligase.
  
 0.930
Veis_0334
Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bte:BTH_II0784 agmatinase, putative; Belongs to the arginase family.
  
 0.919
Veis_4025
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_6311 alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
 0.919
Veis_4457
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pol:Bpro_3016 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.916
Veis_0824
PFAM: aminotransferase class-III; KEGG: rfr:Rfer_0351 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.915
Veis_4438
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rfr:Rfer_0372 methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.914
Veis_4206
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rso:RSc1823 probable nitrilase protein.
   
 0.913
Veis_3532
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: xac:XAC1312 methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.912
Veis_2752
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_2094 AMP-dependent synthetase and ligase.
  
 0.909
Veis_0808
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: xac:XAC3426 flavin monoamine oxidase-related protein.
    
 0.905
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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