STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_4411PFAM: methane/phenol/toluene hydroxylase; KEGG: bja:blr3677 putative monooxygenase component. (556 aa)    
Predicted Functional Partners:
Veis_4409
PFAM: methane/phenol/toluene hydroxylase; KEGG: bja:blr3679 putative monooxygenase component.
 
 
 0.997
Veis_4410
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr3678 putative oxidoreductase.
 
 
 0.995
Veis_4408
PFAM: monooxygenase component MmoB/DmpM; KEGG: bja:blr3680 hypothetical protein.
 
  
 0.989
Veis_4413
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr3675 putative alcohol dehydrogenase.
 
  
  0.975
Veis_2795
PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5681 methane/phenol/toluene hydroxylase.
 
 
 
 0.830
Veis_4404
PFAM: protein of unknown function DUF59; KEGG: bja:blr3682 hypothetical protein.
 
     0.780
Veis_4405
PFAM: amidohydrolase 2; KEGG: bja:blr3681 hypothetical protein.
 
     0.779
Veis_2792
PFAM: Phenol hydroxylase conserved region; KEGG: rme:Rmet_1327 phenol hydroxylase conserved region.
   
 
 0.642
Veis_2794
PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5682 monooxygenase component MmoB/DmpM.
   
 
 0.642
Veis_2791
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: bur:Bcep18194_B2966 oxidoreductase FAD/NAD(P)-binding.
 
   
 0.627
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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