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NGR_a00080 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a00080" - Uncharacterized protein y4cF in Sinorhizobium fredii NGR234
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a00080Uncharacterized protein y4cF; y4cF; NGR234_41 (380 aa)    
Predicted Functional Partners:
repC
Putative replication protein C; y4cI; NGR234_44; To A.rhizogenes possible replication protein C (RepC) (404 aa)
   
     
  0.826
NGR_a00090
Uncharacterized protein y4cE; y4cE; NGR234_40 (391 aa)
              0.761
repB
Putative replication protein B; y4cJ; NGR234_45; Belongs to the ParB family (326 aa)
 
     
  0.740
repA
Putative replication protein A; y4cK; NGR234_46; Belongs to the ParA family (407 aa)
 
     
  0.735
NGR_a00070
Probable DNA-invertase y4cG; y4cG; NGR234_42; Belongs to the site-specific recombinase resolvase family (305 aa)
 
     
  0.705
traD
Probable conjugal transfer protein TraD; traD; NGR234_74; Belongs to the TraD family (71 aa)
   
          0.614
traC
Probable conjugal transfer protein TraC; traC; NGR234_73; To A.tumefaciens Ti plasmid TraC (102 aa)
   
          0.606
traR
Probable transcriptional activator protein TraR; Positive regulation of conjugal transfer. TraR activates target genes in the presence of AAI and also activates traR and traI themselves (By similarity) (236 aa)
   
     
  0.538
traI
Probable acyl-homoserine-lactone synthase; Required for the synthesis of OHHL (N-(3-oxooctanoyl)-L- homoserine lactone), an autoinducer molecule which binds to TraR and thus acts in the control of conjugal transfer (208 aa)
   
     
  0.534
traH
Uncharacterized protein y4dP; y4dP; NGR234_69; To A.tumefaciens Ti plasmid conjugal transfer region I ORFR2 and ORFR3 (200 aa)
   
          0.531
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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