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NGR_a00090 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a00090" - Uncharacterized protein y4cE in Sinorhizobium fredii NGR234
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
NGR_a00090Uncharacterized protein y4cE; y4cE; NGR234_40 (391 aa)    
Predicted Functional Partners:
NGR_a00080
Uncharacterized protein y4cF; y4cF; NGR234_41 (380 aa)
              0.761
NGR_c26820
annotation not available (185 aa)
         
  0.693
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (717 aa)
         
  0.551
NGR_c05830
annotation not available (302 aa)
         
  0.551
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (170 aa)
           
  0.501
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (673 aa)
           
  0.499
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (123 aa)
           
  0.474
exoN
annotation not available (295 aa)
           
  0.471
NGR_c01350
annotation not available (496 aa)
         
  0.456
NGR_c01340
annotation not available (511 aa)
         
  0.425
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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