STRINGSTRING
NGR_a00200 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a00200" - Uncharacterized protein y4bJ in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a00200Uncharacterized protein y4bJ; y4bJ; NGR234_30 (630 aa)    
Predicted Functional Partners:
NGR_a00210
Uncharacterized protein y4bI; y4bI; NGR234_29; To H.influenzae HI_1631 (138 aa)
 
          0.603
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (497 aa)
     
 
  0.525
hcpD
Beta-lactamase HcpD; Cysteine-richprotein D; PBP 4; penicillin-binding protein 4 (201 aa)
 
 
      0.486
NGR_c08170
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane (203 aa)
     
 
  0.473
NGR_c08140
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane (343 aa)
     
 
  0.473
NGR_a03720
Putative outer membrane protein y4fJ; May act as an outer membrane pore (343 aa)
     
 
  0.473
aglA2
annotation not available (548 aa)
     
 
  0.435
aglA1
annotation not available (551 aa)
     
 
  0.435
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (425 aa)
 
     
  0.426
NGR_a00220
Uncharacterized protein y4bH; y4bH; NGR234_28 (91 aa)
              0.425
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (13%) [HD]