STRINGSTRING
AAB91818.1 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"AAB91818.1" - y4bA in Sinorhizobium fredii NGR234
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAB91818.1y4bA; NGR234_21 (694 aa)    
Predicted Functional Partners:
AAB91619.1
y4bC; NGR234_23 (149 aa)
          0.953
AAB91618.1
y4bB; NGR234_22 (88 aa)
              0.845
NGR_a02220
Uncharacterized protein y4oM; Similar to NGRIS-4 family; y4oM; NGR234_276 (149 aa)
          0.793
NGR_a00260
annotation not available (149 aa)
          0.788
AAB91820.1
y4pJ; NGR234_300 (149 aa)
          0.788
RNGR00210
Putative transposase for insertion sequence NGRIS-22a; Similar to y4rI of pNGR234a (444 aa)
   
          0.660
ACP25252.1
Similar to y4rI of pNGR234a (444 aa)
   
          0.660
ACP24721.1
Similar to y4rI of pNGR234a (444 aa)
   
          0.660
NGR_a01740
Uncharacterized protein y4rM; y4rM; NGR234_339 (350 aa)
 
     
  0.654
NGR_a01770
Putative transposase y4rJ; y4rJ; NGR234_336; Belongs to the transposase 20 family (396 aa)
 
          0.544
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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