STRINGSTRING
mucR protein (Sinorhizobium fredii NGR234) - STRING interaction network
"mucR" - Transcriptional regulatory protein MucR homolog in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mucRTranscriptional regulatory protein MucR homolog; Could be involved in the regulation of exopolysaccharide synthesis (143 aa)    
Predicted Functional Partners:
NGR_c27030
annotation not available (242 aa)
   
          0.698
exoR
annotation not available (268 aa)
           
  0.661
exoN
annotation not available (295 aa)
           
  0.660
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes (195 aa)
           
  0.660
phoB
annotation not available (227 aa)
           
  0.660
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family (782 aa)
   
          0.534
NGR_c20590
annotation not available (170 aa)
   
          0.525
NGR_c09700
annotation not available (183 aa)
   
          0.522
NGR_c28390
annotation not available (88 aa)
   
          0.509
rpsU
annotation not available (70 aa)
   
          0.500
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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