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nopP protein (Sinorhizobium fredii NGR234) - STRING interaction network
"nopP" - Effector protein NopP in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nopPEffector protein NopP; y4yP; NGR234_470; Belongs to the NopP family (271 aa)    
Predicted Functional Partners:
nopM
Probable E3 ubiquitin-protein ligase NGR_a03640; Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is an E3 ubiquitin ligase that interferes with host’s ubiquitination pathway (By similarity) (546 aa)
           
  0.661
ttsI
Probable transcriptional regulatory protein y4xI; y4xI; NGR234_447 (226 aa)
           
  0.661
nopL
Nodulation outer protein L; Putative symbiotic effector that modulates nodulation in legumes. When delivered into the plant cell, modulates the activity of signal transduction pathways that culminate in activation of PR proteins (338 aa)
           
  0.661
nopX
Nodulation outer protein X; nolX; NGR234_457 (596 aa)
           
  0.661
nopB
Nodulation protein NolB; nolB; NGR234_459 (164 aa)
           
  0.661
nopC
Nodulation outer protein NopC linked to type III secretion pilus; nopC; YP_052972.1; NGR234_471 (98 aa)
           
  0.661
nopA
Nodulation outer protein NopA of type III secretion pilus subunit; nopA; YP_052973.1; NGR234_472 (71 aa)
           
  0.661
nopT
Putative cysteine protease YopT-like y4zC; Potential cysteine protease, which may play a central role after invasion of host cell (261 aa)
           
  0.661
NGR_c02870
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (320 aa)
           
  0.412
NGR_c02860
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (305 aa)
           
  0.412
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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