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rhcL protein (Sinorhizobium fredii NGR234) - STRING interaction network
"rhcL" - Nodulation protein NolV in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhcLNodulation protein NolV; nolV; NGR234_462 (208 aa)    
Predicted Functional Partners:
rhcQ
Probable translocation protein Y4yK; Could be involved in the secretion of an unknown factor (358 aa)
 
 
  0.997
rhcJ
Nodulation protein NolT; nolT; NGR234_460 (289 aa)
 
   
  0.994
rhcN
Probable ATP synthase y4yI; Could be involved in the secretion of an unknown factor. Probable catalytic subunit of the translocase (451 aa)
 
 
  0.991
rhcT
Probable translocation protein y4yN; Could be involved in the secretion of an unknown factor (272 aa)
 
   
  0.987
rhcS
Probable translocation protein y4yM; Could be involved in the secretion of an unknown factor (91 aa)
 
   
  0.987
rhcU
Probable translocation protein y4yO; Could be involved in the secretion of an unknown factor (345 aa)
 
   
  0.984
rhcC1
Nodulation protein NolW; nolW; NGR234_458 (234 aa)
 
   
  0.974
fliG
annotation not available (343 aa)
   
 
  0.972
rhcR
Probable translocation protein y4yL; Could be involved in the secretion of an unknown factor (222 aa)
 
   
  0.965
fliM
annotation not available (315 aa)
   
 
  0.957
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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