STRINGSTRING
NGR_a01350 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a01350" - Putative transposase y4uE in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a01350Putative transposase y4uE; y4uE; NGR234_388; Belongs to the transposase 9 family (359 aa)    
Predicted Functional Partners:
NGR_a01970
Probable transposase for insertion sequence element ISRM3-like; Required for the transposition of the insertion element (400 aa)
 
          0.576
NGR_a01340
Probable glutamate dehydrogenase; y4uF; NGR234_389 (443 aa)
              0.447
NGR_a00280
annotation not available (694 aa)
 
          0.425
ACP25366.1
annotation not available (694 aa)
 
          0.425
AAB91617.1
y4pH; NGR234_298 (694 aa)
 
          0.425
AAB91818.1
y4bA; NGR234_21 (694 aa)
 
          0.425
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (12%) [HD]