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NGR_a01360 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a01360" - UPF0262 protein y4uD in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a01360UPF0262 protein y4uD; y4uD; NGR234_387; Belongs to the UPF0262 family (165 aa)    
Predicted Functional Partners:
NGR_c10840
annotation not available (151 aa)
 
     
  0.752
NGR_c05300
annotation not available (127 aa)
 
     
  0.748
NGR_c34130
annotation not available (180 aa)
   
     
  0.580
NGR_c32400
annotation not available (135 aa)
   
          0.566
NGR_c12450
annotation not available (145 aa)
   
          0.522
NGR_c19900
annotation not available (133 aa)
 
     
  0.516
NGR_c02260
annotation not available (143 aa)
          0.504
cobT
annotation not available (630 aa)
   
          0.498
pstP
annotation not available (755 aa)
   
          0.489
NGR_c22900
annotation not available (166 aa)
   
          0.487
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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