STRINGSTRING
NGR_a02300 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a02300" - Uncharacterized protein y4nL in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a02300Uncharacterized protein y4nL; Putative nucleotide sugar epimerase/dehydrogenase (356 aa)    
Predicted Functional Partners:
NGR_a02290
Uncharacterized protein y4nM; Possible permease/transporter (516 aa)
 
     
  0.861
NGR_a02310
Uncharacterized protein y4nK; y4nK; NGR234_261 (662 aa)
              0.787
NGR_a03090
Uncharacterized protein y4jF; y4jF; NGR234_172 (519 aa)
   
          0.554
NGR_a03690
Uncharacterized protein y4fM; y4fM; NGR234_110 (311 aa)
 
        0.550
NGR_a02120
Uncharacterized protein y4oX; Could be a NAD-dependent oxidoreductase (360 aa)
 
        0.480
NGR_a03680
Probable ABC transporter permease protein y4fN; Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane (569 aa)
   
          0.471
wbgA
Uncharacterized protein y4gI; y4gI; NGR234_124 (909 aa)
   
 
  0.468
NGR_a02280
Uncharacterized protein y4oA; Similar to y4qC; y4oA; NGR234_264 (593 aa)
   
          0.466
NGR_a02200
Probable amino-acid ABC transporter periplasmic-binding protein y4oP; Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule (431 aa)
   
          0.446
NGR_c18110
annotation not available (264 aa)
 
        0.423
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (18%) [HD]