STRINGSTRING
NGR_a02840 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a02840" - Uncharacterized AAA family ATPase y4kL in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a02840Uncharacterized AAA family ATPase y4kL; y4kL; NGR234_198; Belongs to the AAA ATPase family (330 aa)    
Predicted Functional Partners:
NGR_a02850
Uncharacterized protein y4kK; y4kK; NGR234_197 (312 aa)
 
   
  0.953
NGR_a00160
Uncharacterized protein y4bN; y4bN; NGR234_34 (431 aa)
 
   
  0.759
dnaK2
Chaperone protein DnaK; Acts as a chaperone (641 aa)
 
 
 
  0.716
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1401 aa)
     
 
  0.619
NGR_a00170
Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA; y4kI; NGR234_195; Belongs to the IS21/IS1162 putative ATP-binding protein family (263 aa)
              0.581
AAB91856.1
y4kJ; NGR234_196 (516 aa)
              0.581
NGR_c06890
annotation not available (586 aa)
 
 
0.566
parE
DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily (685 aa)
   
 
  0.556
dnaJ1
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (379 aa)
 
 
  0.551
pgk
annotation not available (399 aa)
 
   
  0.547
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (11%) [HD]