STRINGSTRING
NGR_a02960 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a02960" - Uncharacterized protein y4jS in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a02960Uncharacterized protein y4jS; y4jS; NGR234_185 (413 aa)    
Predicted Functional Partners:
NGR_a02980
Uncharacterized protein y4jQ; y4jQ; NGR234_183 (1039 aa)
 
 
 
  0.969
NGR_a02970
Uncharacterized protein y4jR; y4jR; NGR234_184 (151 aa)
   
 
  0.889
NGR_c07040
annotation not available (598 aa)
   
 
  0.698
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (514 aa)
   
 
  0.686
NGR_c28590
annotation not available (628 aa)
   
 
  0.682
NGR_c00280
annotation not available (755 aa)
   
 
  0.665
metH
annotation not available (1256 aa)
         
  0.650
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1040 aa)
   
   
  0.624
NGR_c34460
annotation not available (917 aa)
   
 
  0.572
NGR_c01850
annotation not available (1168 aa)
     
 
  0.563
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (10%) [HD]