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NGR_a02980 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a02980" - Uncharacterized protein y4jQ in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a02980Uncharacterized protein y4jQ; y4jQ; NGR234_183 (1039 aa)    
Predicted Functional Partners:
NGR_a02960
Uncharacterized protein y4jS; y4jS; NGR234_185 (413 aa)
 
 
 
  0.969
NGR_a02970
Uncharacterized protein y4jR; y4jR; NGR234_184 (151 aa)
     
 
  0.857
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
     
 
  0.711
NGR_c01850
annotation not available (1168 aa)
     
 
  0.671
NGR_c24630
annotation not available (499 aa)
     
 
  0.665
NGR_c34460
annotation not available (917 aa)
     
 
  0.619
NGR_c00280
annotation not available (755 aa)
     
 
  0.596
NGR_c28590
annotation not available (628 aa)
         
  0.588
NGR_c30020
annotation not available (258 aa)
   
 
  0.552
NGR_c26210
annotation not available (213 aa)
   
 
  0.552
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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