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AAB92453.1 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"AAB92453.1" - y4hO in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAB92453.1y4hO; NGR234_144 (115 aa)    
Predicted Functional Partners:
AAB92454.1
y4hP; NGR234_145 (552 aa)
 
          0.934
AAB92452.1
y4hN; NGR234_143 (144 aa)
          0.912
NGR_a03120
Uncharacterized protein y4jD; y4jD; NGR234_170; Belongs to the transposase 25 family (511 aa)
 
          0.800
NGR_a00310
Uncharacterized protein y4aQ; y4aQ; NGR234_17; Belongs to the transposase 25 family (188 aa)
 
          0.796
NGR_a03340
Uncharacterized protein y4hP; Identical to y4hP of pNGR234a; Belongs to the transposase 25 family (552 aa)
 
          0.791
NGR_c05880
annotation not available (545 aa)
 
          0.791
NGR_a01890
Uncharacterized protein y4qI; y4qI; NGR234_319; Belongs to the transposase 25 family (539 aa)
 
          0.791
NGR_a03330
Uncharacterized protein y4hQ; y4hQ; NGR234_146; To A.rhizogenes plasmid pRia4B ORF-3 in virA region (194 aa)
 
          0.771
NGR_c05860
annotation not available (128 aa)
 
          0.582
NGR_a01800
Uncharacterized protein y4rG; y4rG; NGR234_330; Belongs to the transposase 8 family (135 aa)
 
          0.557
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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