STRINGSTRING
fixF protein (Sinorhizobium fredii NGR234) - STRING interaction network
fixF in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixFfixF; NGR234_126 (402 aa)    
Predicted Functional Partners:
wbgA
Uncharacterized protein y4gI; y4gI; NGR234_124 (909 aa)
         
  0.749
rmlB
Probable dTDP-glucose 4,6-dehydratase; y4gF; NGR234_121 (350 aa)
         
  0.685
y4gM
Uncharacterized ABC transporter ATP-binding protein y4gM; y4gM; NGR234_128 (586 aa)
           
  0.661
NGR_c02100
annotation not available (407 aa)
 
     
  0.536
kpsF
annotation not available (336 aa)
 
     
  0.483
NGR_c02090
annotation not available (2500 aa)
 
          0.452
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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