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NGR_a03890 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_a03890" - Uncharacterized protein y4eD in Sinorhizobium fredii NGR234
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_a03890Uncharacterized protein y4eD; y4eD; NGR234_83 (375 aa)    
Predicted Functional Partners:
NGR_c18110
annotation not available (264 aa)
   
   
    0.919
NGR_c26790
annotation not available (782 aa)
 
   
    0.918
NGR_c28720
annotation not available (327 aa)
   
 
  0.904
NGR_c08310
annotation not available (332 aa)
   
   
    0.857
NGR_a03880
Uncharacterized lipoprotein y4eE; y4eE; NGR234_84 (358 aa)
              0.738
NGR_a03690
Uncharacterized protein y4fM; y4fM; NGR234_110 (311 aa)
 
          0.711
cheA2
annotation not available (764 aa)
     
      0.589
NGR_a03680
Probable ABC transporter permease protein y4fN; Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane (569 aa)
 
          0.522
NGR_a03090
Uncharacterized protein y4jF; y4jF; NGR234_172 (519 aa)
 
        0.520
flgK
annotation not available (476 aa)
       
      0.499
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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