STRINGSTRING
traB protein (Sinorhizobium fredii NGR234) - STRING interaction network
"traB" - Probable conjugal transfer protein TraB in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traBProbable conjugal transfer protein TraB; Enhances conjugal transfer of the plasmid (387 aa)    
Predicted Functional Partners:
traF
Probable conjugal transfer protein TraF; Involved in conjugal transfer of the plasmid (188 aa)
 
     
  0.973
traA
Probable conjugal transfer protein TraA; traA; NGR234_72; Belongs to the MobA/MobL family (1102 aa)
 
     
  0.968
traH
Uncharacterized protein y4dP; y4dP; NGR234_69; To A.tumefaciens Ti plasmid conjugal transfer region I ORFR2 and ORFR3 (200 aa)
 
          0.957
traC
Probable conjugal transfer protein TraC; traC; NGR234_73; To A.tumefaciens Ti plasmid TraC (102 aa)
 
     
  0.886
traG
Probable conjugal transfer protein TraG; traG; NGR234_75 (640 aa)
 
     
  0.886
traD
Probable conjugal transfer protein TraD; traD; NGR234_74; Belongs to the TraD family (71 aa)
 
     
  0.881
trbJ
Probable conjugal transfer protein TrbJ; trbJ; NGR234_53; To A.tumefaciens Ti plasmid TrbJ (267 aa)
   
          0.782
trbL
Probable conjugal transfer protein TrbL; trbL; NGR234_55 (391 aa)
   
          0.781
trbH
Probable conjugal transfer protein TrbH; trbH; NGR234_58 (148 aa)
   
          0.781
trbD
Probable conjugal transfer protein TrbD; trbD; NGR234_50 (99 aa)
   
          0.778
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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