STRINGSTRING
NGR_c00450 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c00450" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c00450annotation not available (191 aa)    
Predicted Functional Partners:
NGR_c28420
annotation not available (622 aa)
   
          0.616
NGR_c00470
annotation not available (136 aa)
 
          0.563
NGR_c27090
annotation not available (254 aa)
   
          0.512
NGR_a00350
Uncharacterized HTH-type transcriptional regulator y4aM; Similar to y4wC; y4aM; NGR234_13 (143 aa)
   
          0.488
NGR_a01020
Uncharacterized HTH-type transcriptional regulator y4wC; Similar to y4aM; y4wC; NGR234_424 (143 aa)
   
          0.475
NGR_c09050
annotation not available (149 aa)
   
          0.470
NGR_c22000
annotation not available (122 aa)
   
          0.446
NGR_c09550
annotation not available (170 aa)
   
          0.443
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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