STRINGSTRING
NGR_c01120 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c01120" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c01120annotation not available (260 aa)    
Predicted Functional Partners:
NGR_c01110
annotation not available (361 aa)
 
  0.995
NGR_c01100
annotation not available (341 aa)
 
  0.982
NGR_c01130
annotation not available (206 aa)
 
     
  0.926
NGR_c01090
annotation not available (410 aa)
 
     
  0.794
NGR_c01160
annotation not available (308 aa)
         
  0.536
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate (345 aa)
              0.513
NGR_c26050
annotation not available (348 aa)
   
  0.504
NGR_c26040
annotation not available (332 aa)
   
  0.489
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (232 aa)
              0.468
xylH
annotation not available (438 aa)
   
  0.407
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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