STRINGSTRING
fadD protein (Sinorhizobium fredii NGR234) - STRING interaction network
"fadD" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadDannotation not available (566 aa)    
Predicted Functional Partners:
NGR_c04900
annotation not available (593 aa)
 
 
  0.941
NGR_c01690
annotation not available (598 aa)
 
 
  0.938
NGR_c21590
annotation not available (475 aa)
 
 
  0.924
NGR_c10910
annotation not available (550 aa)
   
 
  0.917
NGR_c02090
annotation not available (2500 aa)
 
 
  0.694
NGR_c03450
annotation not available (154 aa)
           
  0.660
fadB
annotation not available (737 aa)
 
 
  0.471
paaN
annotation not available (685 aa)
   
 
  0.450
pgi
annotation not available (541 aa)
   
        0.434
NGR_c12550
annotation not available (320 aa)
   
   
  0.413
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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