STRINGSTRING
NGR_c03850 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c03850" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c03850annotation not available (457 aa)    
Predicted Functional Partners:
gshB2
annotation not available (315 aa)
       
  0.962
NGR_c34750
annotation not available (463 aa)
   
 
  0.910
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (497 aa)
     
 
  0.905
NGR_c34400
annotation not available (687 aa)
     
 
    0.903
NGR_c34100
annotation not available (698 aa)
     
 
    0.903
ilvE
annotation not available (365 aa)
         
  0.900
NGR_c07270
annotation not available (293 aa)
         
  0.900
NGR_c07880
annotation not available (886 aa)
         
    0.900
pepD
annotation not available (500 aa)
         
    0.900
cysK1
annotation not available (366 aa)
         
  0.804
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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