STRINGSTRING
NGR_c04120 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c04120" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c04120annotation not available (282 aa)    
Predicted Functional Partners:
ribF
annotation not available (356 aa)
   
        0.887
groEL1
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (545 aa)
   
      0.652
hisS
annotation not available (507 aa)
 
        0.636
NGR_c08550
annotation not available (202 aa)
   
     
  0.627
dcd
annotation not available (365 aa)
   
          0.624
NGR_a01020
Uncharacterized HTH-type transcriptional regulator y4wC; Similar to y4aM; y4wC; NGR234_424 (143 aa)
   
          0.603
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (973 aa)
              0.601
NGR_c27090
annotation not available (254 aa)
 
        0.592
NGR_a00350
Uncharacterized HTH-type transcriptional regulator y4aM; Similar to y4wC; y4aM; NGR234_13 (143 aa)
   
          0.591
NGR_c22870
annotation not available (460 aa)
   
      0.583
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (13%) [HD]