STRINGSTRING
NGR_c04300 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c04300" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c04300annotation not available (574 aa)    
Predicted Functional Partners:
NGR_c00280
annotation not available (755 aa)
 
  0.960
NGR_c34460
annotation not available (917 aa)
 
  0.944
NGR_c18600
annotation not available (415 aa)
 
 
  0.866
NGR_c10800
annotation not available (455 aa)
 
  0.860
NGR_c01850
annotation not available (1168 aa)
   
 
  0.853
NGR_c30300
annotation not available (415 aa)
 
 
  0.845
NGR_c07610
annotation not available (527 aa)
 
 
  0.815
NGR_c00850
annotation not available (665 aa)
 
 
  0.791
NGR_c07040
annotation not available (598 aa)
 
 
  0.790
cheA2
annotation not available (764 aa)
 
   
  0.789
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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