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glyQ protein (Sinorhizobium fredii NGR234) - STRING interaction network
"glyQ" - glycine--tRNA ligasealpha chain in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glyQglycine--tRNA ligasealpha chain; GlyRS (320 aa)    
Predicted Functional Partners:
glyS
glycine--tRNA ligasebeta chain; GlyRS (721 aa)
  0.999
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
         
  0.685
pheT
annotation not available (808 aa)
   
   
  0.674
NGR_c04650
annotation not available (182 aa)
              0.637
pheS
annotation not available (360 aa)
     
   
  0.635
NGR_c04640
annotation not available (179 aa)
              0.604
NGR_c04660
annotation not available (645 aa)
              0.584
NGR_a02290
Uncharacterized protein y4nM; Possible permease/transporter (516 aa)
   
   
  0.575
NGR_c04620
annotation not available (63 aa)
              0.571
hisS
annotation not available (507 aa)
   
   
  0.559
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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