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NGR_c04970 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c04970" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c04970annotation not available (459 aa)    
Predicted Functional Partners:
NGR_a01970
Probable transposase for insertion sequence element ISRM3-like; Required for the transposition of the insertion element (400 aa)
 
          0.601
NGR_c13120
annotation not available (313 aa)
   
          0.565
ACP25596.1
annotation not available (313 aa)
   
          0.565
ACP25093.1
annotation not available (313 aa)
   
          0.565
NGR_c05360
annotation not available (316 aa)
   
          0.539
NGR_c04960
annotation not available (307 aa)
              0.482
NGR_c04990
annotation not available (309 aa)
              0.425
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (84 aa)
              0.425
NGR_a00280
annotation not available (694 aa)
 
          0.404
ACP25366.1
annotation not available (694 aa)
 
          0.404
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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