Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP24326.1 | ACP24327.1 | NGR_c05300 | NGR_c05310 | Hypothetical protein. | Hypothetical protein. | 0.852 |
ACP24326.1 | ACP27273.1 | NGR_c05300 | NGR_c35500 | Hypothetical protein. | Cytochrome c, class I. | 0.483 |
ACP24326.1 | ctaA | NGR_c05300 | NGR_c10180 | Hypothetical protein. | Putative cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.401 |
ACP24326.1 | ctaB | NGR_c05300 | NGR_c05250 | Hypothetical protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.660 |
ACP24326.1 | ctaC | NGR_c05300 | NGR_c05230 | Hypothetical protein. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.501 |
ACP24326.1 | ctaD | NGR_c05300 | NGR_c05240 | Hypothetical protein. | Cytochrome o ubiquinol oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.499 |
ACP24326.1 | ctaE | NGR_c05300 | NGR_c05280 | Hypothetical protein. | Cytochrome c oxidase subunit III. | 0.846 |
ACP24326.1 | ctaG | NGR_c05300 | NGR_c05270 | Hypothetical protein. | Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.822 |
ACP24327.1 | ACP24326.1 | NGR_c05310 | NGR_c05300 | Hypothetical protein. | Hypothetical protein. | 0.852 |
ACP24327.1 | ACP26308.1 | NGR_c05310 | NGR_c25510 | Hypothetical protein. | Cytochrome c family protein. | 0.670 |
ACP24327.1 | ACP27273.1 | NGR_c05310 | NGR_c35500 | Hypothetical protein. | Cytochrome c, class I. | 0.787 |
ACP24327.1 | ctaA | NGR_c05310 | NGR_c10180 | Hypothetical protein. | Putative cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.953 |
ACP24327.1 | ctaB | NGR_c05310 | NGR_c05250 | Hypothetical protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.867 |
ACP24327.1 | ctaC | NGR_c05310 | NGR_c05230 | Hypothetical protein. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.732 |
ACP24327.1 | ctaD | NGR_c05310 | NGR_c05240 | Hypothetical protein. | Cytochrome o ubiquinol oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.743 |
ACP24327.1 | ctaE | NGR_c05310 | NGR_c05280 | Hypothetical protein. | Cytochrome c oxidase subunit III. | 0.889 |
ACP24327.1 | ctaG | NGR_c05310 | NGR_c05270 | Hypothetical protein. | Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.981 |
ACP24327.1 | senC | NGR_c05310 | NGR_c20870 | Hypothetical protein. | Putative electron transport protein; SCO1/SenC/PrrC-like. | 0.715 |
ACP26308.1 | ACP24327.1 | NGR_c25510 | NGR_c05310 | Cytochrome c family protein. | Hypothetical protein. | 0.670 |
ACP26308.1 | ACP27273.1 | NGR_c25510 | NGR_c35500 | Cytochrome c family protein. | Cytochrome c, class I. | 0.911 |
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