STRINGSTRING
NGR_c05400 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c05400" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c05400annotation not available (971 aa)    
Predicted Functional Partners:
rimJ
annotation not available (203 aa)
 
        0.860
NGR_c13200
annotation not available (140 aa)
   
          0.702
NGR_c27570
annotation not available (116 aa)
   
          0.682
NGR_c28760
annotation not available (120 aa)
   
 
 
  0.673
NGR_c28360
annotation not available (158 aa)
   
          0.620
NGR_c07870
annotation not available (775 aa)
 
 
  0.609
NGR_c12630
annotation not available (333 aa)
   
          0.603
NGR_c13210
annotation not available (266 aa)
   
          0.561
NGR_c16500
annotation not available (861 aa)
 
 
  0.555
NGR_c00500
annotation not available (85 aa)
   
          0.536
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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