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NGR_c05580 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c05580" - annotation not available in Sinorhizobium fredii NGR234
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c05580annotation not available (268 aa)    
Predicted Functional Partners:
NGR_c26810
annotation not available (207 aa)
 
 
  0.752
NGR_c05570
annotation not available (168 aa)
 
          0.728
NGR_c26930
Putative Thiol-disulfide interchange protein TlpA; Cytochrome c biogenesisprotein TlpA (224 aa)
 
 
  0.678
NGR_c32340
annotation not available (203 aa)
   
 
  0.630
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (446 aa)
   
 
  0.615
NGR_c05590
annotation not available (123 aa)
              0.595
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (66 aa)
       
 
  0.583
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning; Belongs to the SMC family (1153 aa)
   
   
  0.543
rpmC
annotation not available (66 aa)
       
      0.536
rplW
50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (97 aa)
       
      0.536
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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