STRINGSTRING
NGR_c08530 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c08530" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c08530annotation not available (321 aa)    
Predicted Functional Partners:
NGR_c08550
annotation not available (202 aa)
 
          0.906
NGR_c08560
Putative aminomethyltransferase protein; Glycine cleavage; Belongs to the GcvT family (282 aa)
              0.883
NGR_c08540
annotation not available (179 aa)
 
          0.881
nadA
Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate (359 aa)
 
     
  0.656
nadC
Carboxylating nicotinate-nucleotide pyrophosphorylase; Quinolinate phosphoribosyltransferase[decarboxylating]; QAPRTase; Belongs to the NadC/ModD family (318 aa)
 
     
  0.623
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (532 aa)
 
     
  0.586
NGR_c08570
annotation not available (248 aa)
              0.553
NGR_c08580
annotation not available (89 aa)
              0.514
NGR_c08590
annotation not available (147 aa)
 
          0.459
NGR_c08600
annotation not available (156 aa)
 
     
  0.426
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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