STRINGSTRING
NGR_c08580 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c08580" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c08580annotation not available (89 aa)    
Predicted Functional Partners:
NGR_c08570
annotation not available (248 aa)
 
          0.898
NGR_c02630
annotation not available (246 aa)
   
          0.718
NGR_c05190
annotation not available (86 aa)
   
          0.664
NGR_c16220
annotation not available (134 aa)
   
          0.640
fliM
annotation not available (315 aa)
   
          0.607
NGR_c03030
annotation not available (137 aa)
   
          0.605
NGR_c16560
annotation not available (183 aa)
   
          0.603
NGR_c03050
annotation not available (122 aa)
   
          0.593
NGR_c02620
annotation not available (245 aa)
   
          0.586
NGR_c08540
annotation not available (179 aa)
 
          0.576
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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