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NGR_c09300 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c09300" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c09300annotation not available (460 aa)    
Predicted Functional Partners:
NGR_c09290
Lysyl-tRNA synthetase 2; lysine--tRNA ligase 2; LysRS 2 (870 aa)
 
   
  0.975
NGR_c09280
annotation not available (198 aa)
 
          0.666
NGR_c09270
annotation not available (710 aa)
         
  0.572
NGR_c04890
annotation not available (329 aa)
   
          0.524
NGR_a02340
Uncharacterized protein y4nH; y4nH; NGR234_258 (117 aa)
   
          0.466
NGR_c02030
annotation not available (69 aa)
   
          0.464
ACP24721.1
Similar to y4rI of pNGR234a (444 aa)
              0.440
NGR_c07750
annotation not available (83 aa)
   
          0.436
NGR_c03600
annotation not available (81 aa)
   
          0.407
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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