STRINGSTRING
NGR_c09900 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c09900" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c09900annotation not available (91 aa)    
Predicted Functional Partners:
NGR_c09920
annotation not available (171 aa)
 
          0.906
NGR_c28940
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (821 aa)
         
    0.900
NGR_c09910
annotation not available (452 aa)
 
          0.893
NGR_c09940
annotation not available (403 aa)
 
          0.714
nirK
Copper-containing nitrite reductase; Cu-NIR (376 aa)
 
          0.692
NGR_c09800
annotation not available (168 aa)
   
          0.662
nirV
annotation not available (304 aa)
 
          0.604
NGR_c09930
annotation not available (97 aa)
         
  0.560
hemN
annotation not available (450 aa)
 
          0.553
norB
annotation not available (448 aa)
 
          0.522
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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