STRINGSTRING
NGR_c11020 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c11020" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c11020annotation not available (226 aa)    
Predicted Functional Partners:
NGR_c28810
annotation not available (1089 aa)
 
        0.775
NGR_c26270
annotation not available (989 aa)
   
        0.758
rpmI
annotation not available (67 aa)
   
        0.682
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (73 aa)
     
        0.596
NGR_c18220
annotation not available (313 aa)
   
          0.593
NGR_c10710
annotation not available (155 aa)
   
          0.494
NGR_c11030
annotation not available (154 aa)
              0.489
cya3
annotation not available (500 aa)
 
        0.488
NGR_c28840
annotation not available (153 aa)
   
          0.488
trxA
annotation not available (107 aa)
     
 
  0.485
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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