STRINGSTRING
NGR_c12580 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c12580" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c12580annotation not available (148 aa)    
Predicted Functional Partners:
NGR_c15400
annotation not available (388 aa)
   
 
  0.946
nifS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Seems to participate in the biosynthesis of the nitrogenase metalloclusters by providing the inorganic sulfur required for the Fe-S core formation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily (387 aa)
   
 
  0.946
NGR_c21210
annotation not available (272 aa)
   
 
  0.941
sufS
annotation not available (417 aa)
 
 
  0.850
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (200 aa)
   
 
  0.768
dnaK2
Chaperone protein DnaK; Acts as a chaperone (641 aa)
   
 
  0.689
NGR_c07930
annotation not available (429 aa)
   
 
  0.689
cyaC
annotation not available (558 aa)
   
 
  0.662
NGR_c16660
annotation not available (106 aa)
   
 
  0.659
dcd
annotation not available (365 aa)
 
          0.655
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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