STRINGSTRING
NGR_c12780 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c12780" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c12780annotation not available (295 aa)    
Predicted Functional Partners:
kdsA
annotation not available (279 aa)
              0.883
NGR_c12480
annotation not available (242 aa)
   
          0.673
NGR_c35420
annotation not available (105 aa)
   
          0.639
NGR_c20920
annotation not available (102 aa)
   
          0.631
NGR_c26670
annotation not available (106 aa)
   
          0.619
NGR_c03360
Uncharacterized protein; Similar to phasin 2 (148 aa)
   
          0.615
NGR_c31150
annotation not available (128 aa)
   
          0.596
NGR_c31240
annotation not available (167 aa)
   
          0.594
NGR_c15350
annotation not available (1128 aa)
   
          0.594
NGR_c04540
annotation not available (177 aa)
   
          0.589
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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