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NGR_c13830 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c13830" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c13830annotation not available (279 aa)    
Predicted Functional Partners:
NGR_c13820
annotation not available (122 aa)
 
          0.904
NGR_c32770
annotation not available (360 aa)
   
  0.873
ispB
annotation not available (338 aa)
   
  0.873
ispA
Probable farnesyl diphosphate synthase; y4kU; NGR234_208 (332 aa)
   
  0.873
lpxD
Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (247 aa)
     
  0.831
secD2
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (855 aa)
         
  0.804
NGR_c26660
Putative SAM-dependent methyltransferase protein; Similar to BioC (315 aa)
 
 
  0.781
yajC
Preprotein translocase; YajC (110 aa)
              0.694
NGR_c13840
annotation not available (154 aa)
              0.608
NGR_c32080
annotation not available (541 aa)
   
          0.593
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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