STRINGSTRING
NGR_c15220 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c15220" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c15220annotation not available (362 aa)    
Predicted Functional Partners:
NGR_c25190
annotation not available (461 aa)
 
 
  0.926
NGR_c09160
annotation not available (298 aa)
 
 
  0.904
NGR_c25180
annotation not available (295 aa)
 
  0.903
NGR_c25200
annotation not available (300 aa)
 
 
  0.896
NGR_c15210
annotation not available (336 aa)
              0.883
NGR_c25170
annotation not available (241 aa)
 
  0.874
NGR_c34340
annotation not available (290 aa)
   
 
  0.839
NGR_c30570
annotation not available (295 aa)
   
 
  0.839
NGR_c20670
annotation not available (288 aa)
   
 
  0.839
NGR_c06000
annotation not available (295 aa)
   
 
  0.839
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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