STRINGSTRING
NGR_c15390 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c15390" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c15390annotation not available (225 aa)    
Predicted Functional Partners:
NGR_c33340
annotation not available (233 aa)
   
          0.704
NGR_c34960
annotation not available (215 aa)
   
          0.573
NGR_c20590
annotation not available (170 aa)
   
          0.572
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (276 aa)
   
          0.571
comL
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (288 aa)
 
          0.562
NGR_c15400
annotation not available (388 aa)
              0.536
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (256 aa)
 
          0.530
rpsU
annotation not available (70 aa)
   
          0.527
NGR_c35950
annotation not available (208 aa)
 
          0.524
NGR_c32680
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (112 aa)
   
     
  0.506
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (13%) [HD]