STRINGSTRING
fixI1 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"fixI1" - Nitrogen fixation protein FixI in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixI1Nitrogen fixation protein FixI; E1-E2 type cation ATPase FixI (754 aa)    
Predicted Functional Partners:
fixG
annotation not available (523 aa)
 
     
  0.966
fixS2
annotation not available (52 aa)
 
   
  0.961
fixH
annotation not available (164 aa)
 
     
  0.960
fixP2
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex (287 aa)
 
     
  0.775
fixN1
annotation not available (563 aa)
 
     
  0.772
fixN2
annotation not available (539 aa)
 
     
  0.756
fixO2
annotation not available (243 aa)
 
     
  0.755
fixP1
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex (293 aa)
 
     
  0.747
fixO1
annotation not available (269 aa)
 
     
  0.735
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1040 aa)
   
   
  0.674
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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