STRINGSTRING
NGR_c18110 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c18110" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c18110annotation not available (264 aa)    
Predicted Functional Partners:
NGR_c26790
annotation not available (782 aa)
 
   
    0.922
NGR_a03890
Uncharacterized protein y4eD; y4eD; NGR234_83 (375 aa)
   
   
    0.919
NGR_c28720
annotation not available (327 aa)
   
 
  0.904
cobB
Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family (431 aa)
         
  0.854
cobC
annotation not available (333 aa)
   
        0.846
cobA
annotation not available (280 aa)
              0.843
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (326 aa)
              0.843
NGR_c08310
annotation not available (332 aa)
   
   
    0.829
cheA2
annotation not available (764 aa)
     
      0.589
NGR_c18160
annotation not available (556 aa)
              0.550
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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