STRINGSTRING
NGR_c18380 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c18380" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c18380annotation not available (232 aa)    
Predicted Functional Partners:
NGR_c18460
annotation not available (320 aa)
     
  0.985
NGR_c18290
annotation not available (352 aa)
     
  0.980
NGR_c18370
annotation not available (524 aa)
 
     
  0.823
NGR_c18490
annotation not available (691 aa)
 
     
  0.817
NGR_c18400
annotation not available (206 aa)
 
          0.812
NGR_c18440
annotation not available (100 aa)
 
          0.803
NGR_c18360
annotation not available (234 aa)
 
          0.605
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (344 aa)
         
  0.533
mttB
annotation not available (514 aa)
 
     
  0.514
metH
annotation not available (1256 aa)
 
     
0.483
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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