STRINGSTRING
NGR_c18410 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c18410" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c18410annotation not available (272 aa)    
Predicted Functional Partners:
NGR_c18420
annotation not available (64 aa)
              0.800
NGR_c33300
annotation not available (473 aa)
   
   
  0.739
NGR_c35980
annotation not available (146 aa)
 
          0.651
pheT
annotation not available (808 aa)
         
  0.636
NGR_c12680
annotation not available (143 aa)
   
          0.602
NGR_c08450
annotation not available (942 aa)
   
          0.596
NGR_c18400
annotation not available (206 aa)
 
          0.565
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (952 aa)
           
  0.536
NGR_c01020
annotation not available (187 aa)
   
        0.510
NGR_c13270
annotation not available (245 aa)
 
          0.469
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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