STRINGSTRING
NGR_c18450 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c18450" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c18450annotation not available (363 aa)    
Predicted Functional Partners:
NGR_c18290
annotation not available (352 aa)
  0.996
metH
annotation not available (1256 aa)
   
  0.975
NGR_c18460
annotation not available (320 aa)
 
 
 
  0.845
NGR_c18490
annotation not available (691 aa)
 
     
  0.782
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (952 aa)
   
   
  0.686
NGR_c18440
annotation not available (100 aa)
 
          0.660
ppdK
annotation not available (896 aa)
   
   
  0.656
NGR_c18370
annotation not available (524 aa)
 
          0.590
metA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine; Belongs to the MetA family (307 aa)
   
   
  0.589
NGR_c34100
annotation not available (698 aa)
   
          0.580
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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