STRINGSTRING
NGR_c18700 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c18700" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c18700annotation not available (409 aa)    
Predicted Functional Partners:
NGR_c18690
annotation not available (160 aa)
 
          0.973
NGR_c18710
annotation not available (565 aa)
 
        0.882
tolC
annotation not available (456 aa)
   
 
  0.636
NGR_c18720
annotation not available (292 aa)
 
          0.606
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
         
  0.536
NGR_c15900
annotation not available (196 aa)
   
          0.534
NGR_c15890
annotation not available (195 aa)
   
          0.474
NGR_c27740
annotation not available (254 aa)
   
        0.456
NGR_c32660
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (288 aa)
       
 
  0.456
rpoH
annotation not available (301 aa)
       
 
  0.456
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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