STRINGSTRING
NGR_c19310 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c19310" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c19310annotation not available (70 aa)    
Predicted Functional Partners:
NGR_c19320
annotation not available (280 aa)
          0.990
NGR_c31640
annotation not available (942 aa)
   
          0.736
NGR_c23130
annotation not available (1184 aa)
   
          0.733
NGR_c34310
annotation not available (587 aa)
   
          0.707
NGR_a02600
Uncharacterized protein y4lR; y4lR; NGR234_229 (522 aa)
   
          0.699
gspL
annotation not available (353 aa)
   
          0.671
NGR_c00920
annotation not available (580 aa)
   
          0.644
NGR_c23090
annotation not available (157 aa)
   
          0.579
NGR_c19330
annotation not available (976 aa)
 
          0.566
NGR_c00930
annotation not available (219 aa)
   
          0.565
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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