STRINGSTRING
macA protein (Sinorhizobium fredii NGR234) - STRING interaction network
"macA" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macAannotation not available (422 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
 
 
  0.998
tolC
annotation not available (456 aa)
 
 
  0.759
NGR_c35210
annotation not available (1048 aa)
 
 
  0.680
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner (228 aa)
   
 
  0.677
NGR_c10690
annotation not available (436 aa)
   
 
  0.647
chvI
Transcriptional regulatory protein ChvI; Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan (241 aa)
   
   
  0.638
rpoH
annotation not available (301 aa)
     
 
  0.617
NGR_c08190
annotation not available (688 aa)
   
        0.603
NGR_c00620
annotation not available (1061 aa)
 
 
  0.601
mexF
annotation not available (1058 aa)
 
 
  0.598
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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