STRINGSTRING
NGR_c20250 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c20250" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c20250annotation not available (128 aa)    
Predicted Functional Partners:
NGR_c20260
annotation not available (61 aa)
              0.858
NGR_c20280
Protein HflK; HflC and HflK could encode or regulate a protease (361 aa)
              0.845
NGR_c20270
Protein HflC; HflC and HflK could regulate a protease (310 aa)
              0.845
degP
annotation not available (502 aa)
              0.473
gst2
annotation not available (201 aa)
              0.465
folA
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (179 aa)
              0.465
NGR_c07230
annotation not available (183 aa)
   
          0.428
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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